Theory & Simulation


General informations

SISSA and University of Cagliari, Trieste and Cagliari, Italy
Main techniques and methods
Density Functional Theory simulations, Molecular dynamics with force fields
Key instumentation
- HPC clusters: ELCID@CNR-IOM (512 cores)
- Ulysses@SISSA (~2000 cores)

NanoMat is a laboratory for the theoretical study of materials at the atomic scale using computer simulations

We investigate structural, electronic and optical properties of materials using Density Functional Theory (DFT), Time-Dependent DFT and Many-Body Perturbation Theory (GW and Bethe-Salpeter Equation). We employ both classical and first principles molecular dynamics to simulate materials in contact with liquids. Chemical reactions are modelled using techniques such as the Nudged Elastic Band method, Activation Relaxation Technique and Metadynamics.

To perform large-scale molecular dynamics of materials we use (semi)-empirical and multi-model approaches, in particular: Semi-empirical tight binding for silicon-based systems and hybrid perovskites, and generalized SMTB-Q potentials for semiconductors and metal/semiconductor oxides; Classical molecular dynamics simulations are performed with community codes(such as LAMMPS, DL_POLY, NAMD); We generate in-house software and numerical tools to model polymers, hybrid interfaces and nanostructures, as well as for generating and interfacing to molecular dynamics codes; We use classical MD simulations and nonequilibrium statistical mechanics to model the complexity of strongly out-of-equilibrium and non-linear processes at both nano and mesoscale, such as friction and interface dissipative phenomena.

Development of new methods, instrumentation, software

The group is active in the development of a number of software packages. We are developing interfaces between third-party codes and the open-source Quantum-ESPRESSO package for DFT simulations. Current efforts include interfacing PLUMED and ARTn with Quantum ESPRESSO, to enable the calculation of free-energy surfaces and reaction paths by means of metadynamics (PLUMED) or by means of the calculation of hessian matrix from finite differences (ARTn). In addition, a significant effort is being devoted to the development of a multi-approach and multi-scaling software to address activated processes from accurate single-event calculations to large scale manufacturing and working conditions modeling. The development involves research on topological and geometrical descriptors, event-based Kinetic Monte-Carlo off lattice, new semi-empirical potentials, semi-empirical equations for the effect of electric fields and machine learning. The group is also maintaining and using the GW-BSE plane wave code SaX.  

We develop the PWSIC parallel code for structural and electronic properties calculations, implementing the variational pseudo-self-interaction correction approach (VPSIC), developed by A. Filippetti and co-workers over the years, capable of describing efficiently and accurately the properties of strongly correlated materials. We are also developing the BoltzTraP code for the calculation of transport properties according to the Bloch-Boltzmann formalism, extending the approach to energy-dependent scattering time.

We developed the first family of classical force fields for hybrid perovskites (MYP models from A. Mattoni group).

Research Activity

The research activity of the group is dedicated to the theoretical study of materials, surfaces, interfaces, catalytic and dissipative processes using computer simulations. The research themes covered are the following:

T1) Study of catalytic properties of metals, metal oxides and metal nanoparticles deposited on oxide surfaces using density functional theory simulations. The aim is to gain fundamental understanding of the materials properties governing the catalytic behavior. Processes of interest include redox reactions taking place in fuel cells and in electrolyzers, photoelectrochemical water splitting, heterogeneous reactions of relevance for the chemical industry such as the epoxidation of ethylene;

T2) Study of different aspects of nanomechanics, specifically underlying the nature of atomic friction and interface dissipation from nano to mesoscale. By looking at the dynamics of confined systems under shear, the study explores processes occurring in dry (e.g., graphitic) and lubricated (e.g., ionic liquid) contacts. Via MD simulations and nonequilibrium statistical mechanics, investigations address dissipative mechanisms in different kinds of systems, including manipulation and diffusion of clusters and nano-objects at surfaces, optically trapped cold ions and colloidal suspensions;

T3) Multiscale modeling of nanomaterials for photovoltaics: classical (thermodynamics, degradation, microstructure evolution) and ab initio (optical, transport, recombination properties) modeling of:  hybrid perovskites, polymer-based blends, hybrid organic/oxide nanomaterials;

T4) Classical and ab initio study of electric and thermoelectric transport properties for energy-harvesting and thermoelectric applications;

T5) Ab initio study of magnetic, ferroic and strongly correlated materials, in particular oxide heterostructures, for spintronics and spin-orbitronics applications (e.g. spin-transistors, spin-torque, spin-orbit qubit devices);

T6) Study of point defects in bulk and surfaces of semiconductors and insulators, in the context of i) optical fibers and micro-electronic devices used and/or to be used in harsh environments and ii) Cultural Heritage.

  1. i) The objective is to gain understanding on the fundamental processes that are responsible for the degradation of device performances and to build a link between accurate calculations and mesoscopic/empirical theories, such contributing to improvements of R&D Technology Aided Design (TCAD) frameworks.
  2. ii) First principles techniques are applied to the study of materials constituting the colored pigments in the paintings of the European Impressionist and Modernist period (late 1800 early 1900) as a tool complementary to experiments. The aim is to improve the understanding of photo-degradation processes severely and irreversibly affecting some colored pigments.



PON Netergit, M2M Netergit, 2017-2021
CEA, France, Development of an Interatomic potential SMTB-Q for the generation of oxide/semiconductor interfaces, 2019

Main collaborations

  • CNR-NANO, Modena, Italy
  • CNR-IFN and Politecnico di Milano, Italy
  • CNR-SPIN and University of Genova, Italy
  • Max Planck Institute, Berlin, Germany
  • Charles University, Prague, Czech Republic
  • University of Konstanz, Germany
  • Tel Aviv University, Israel
  • University of Basel, Switzerland
  • Trinity College Dublin, Ireland
  • Luxembourg Institute of Standard and Technology, Luxembourg
  • Centre Interdisciplinaire de Nanoscience de Marseille, CNRS, France
  • Technische Universität München, Germany
  • Ecole polytechnique fédérale de Lausanne, Switzerland
  • University of North Texas, Denton, USA
  • CNRS-LAAS, Toulouse, France
  • CEA-DAM, France

Key publications

Nature Communications, 7, 2016 doi:10.1038/ncomms10801

Creating single-atom Pt-ceria catalysts by surface step decoration

Dvořák F., Camellone M.F., Tovt A., Tran N.-D., Negreiros F.R., Vorokhta M., Skála T., Matolínová I., Mysliveček J., Matolín V., Fabris S.
Nature Nanotechnology, 11-12:1082-1086, 2016 doi:10.1038/nnano.2016.151

Multiwalled nanotube faceting unravelled

Leven I., Guerra R., Vanossi A., Tosatti E., Hod O.
Journal of the American Chemical Society, 138-36:11560-11567, 2016 doi:10.1021/jacs.6b03446

Catalytic Proton Dynamics at the Water/Solid Interface of Ceria-Supported Pt Clusters

Farnesi Camellone M., Negreiros Ribeiro F., Szabová L., Tateyama Y., Fabris S.
Advances in Physics: X, 2-3:569-590, 2017 doi:10.1080/23746149.2017.1330123

Current trends in the physics of nanoscale friction

Manini N., Mistura G., Paolicelli G., Tosatti E., Vanossi A.
ACS Nano, 11-9:9183-9190, 2017 doi:10.1021/acsnano.7b04116

Collective Molecular Mechanisms in the CH<inf>3</inf>NH<inf>3</inf>PbI<inf>3</inf> Dissolution by Liquid Water

Caddeo C., Saba M.I., Meloni S., Filippetti A., Mattoni A.
Advanced Energy Materials, 7-4, 2017 doi:10.1002/aenm.201601486

Toward High-Temperature Stability of PTB7-Based Bulk Heterojunction Solar Cells: Impact of Fullerene Size and Solvent Additive

Dkhil S.B., Pfannmöller M., Saba M.I., Gaceur M., Heidari H., Videlot-Ackermann C., Margeat O., Guerrero A., Bisquert J., Garcia-Belmonte G., Mattoni A., Bals S., Ackermann J.
Nature Chemistry, 10-10:1008-1015, 2018 doi:10.1038/s41557-018-0125-5

Free-atom-like d states in single-atom alloy catalysts

Greiner M.T., Jones T.E., Beeg S., Zwiener L., Scherzer M., Girgsdies F., Piccinin S., Armbrüster M., Knop-Gericke A., Schlögl R.
Physical Review X, 8-1, 2018 doi:10.1103/PhysRevX.8.011050

Experimental Observation of the Aubry Transition in Two-Dimensional Colloidal Monolayers

Brazda T., Silva A., Manini N., Vanossi A., Guerra R., Tosatti E., Bechinger C.
ACS Catalysis, 8-5:3844-3852, 2018 doi:10.1021/acscatal.8b00660

The Selective Species in Ethylene Epoxidation on Silver

Jones T.E., Wyrwich R., Böcklein S., Carbonio E.A., Greiner M.T., Klyushin A.Y., Moritz W., Locatelli A., Menteş T.O., Niño M.A., Knop-Gericke A., Schlögl R., Günther S., Wintterlin J., Piccinin S.